Andrew
I agree with mike, you should be able to exclude certain pages (especially print version pages!) from the listing.
We are already working on it. This feature will be added in a few days.
I'm also not sure I like the way it handles templates, in some of the books I've looked at, many templates don't appear at all!
Are you talking about mediawiki templates? If so, we generate PDF documents using html from mediawiki. We can't control what comes from there.
the tool should also append the GFDL, if it isn't there already (some books do a good job of linking to it). The attribution for authors is a job we are all going to have to work on.
I have written about it in previous letters. It will be appended in the future version.
Robert