In article slrnimkfjp.fte.saper@saper.info, Marcin Cieslak saper@saper.info wrote:
Magnus Manske magnusmanske@googlemail.com wrote:
I have a wrapper script that starts a handful of jobs on the toolserver (via qsub). But, when I put that wrapper script as a "normal" cronjob, I get some error messages about qsub not found. Starting the wrapper via cronsub doesn't work either.
You should first run cronsub from the command-line with the same arguments. If that still doesn't work, post the entire command line and any output from it.
Once you have it working from the command-line then it should be fine fromc ron.
Actually cronsub does a litle bit more than sourcing /sge62/default/common/settings.sh file, so I don't know why it's not working for you. Maybe you could share some output?
cronsub makes it easier to submit longrun jobs, automatically sets the default output file, runs the script from $HOME and prevents duplicate jobs being submitted. Otherwise it's identical to qsub.
- river.