I'm having the same problem, for two days, and by what i can see, it's happening only on hawthorn.
Alchimista
2013/2/3 Bryan Tong Minh bryan.tongminh@gmail.com
Hello,
SGE is spewing out various JSV errors, included below. Anybody an idea what is going on?
Bryan
Cron bryan@hawthorn qcronsub -l h_rt=00:10:00 -l arch=* -l virtual_free=200M -e $HOME/replag-plot.err -N replag-plot /home/bryan/public_html/stats/replag/make-plot.sh error: JSV stderr: Traceback (most recent call last): error: JSV stderr: File "/sge/GE/bin/sol-amd64/ qjobtest", line 108, in <module> error: JSV stderr: dom = minidom.parse(child_stdout) error: JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/minidom.py", line 1915, in parse error: JSV stderr: return expatbuilder.parse(file) error: JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/expatbuilder.py", line 930, in parse error: JSV stderr: result = builder.parseFile(file) error: JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/expatbuilder.py", line 207, in parseFile error: JSV stderr: parser.Parse(buffer, 0) error: JSV stderr: xml.parsers.expat.ExpatError: syntax error: line 1, column 0 Unable to run job: JSV stderr: Traceback (most recent call last): JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 108, in <module> JSV stderr: dom = minidom.parse(child_stdout) JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/minidom.py", line 1915, in parse JSV stderr: return expatbuilder.parse(file) JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/expatbuilder.py", line 930, in parse JSV stderr: result = builder.parseFile(file) JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/site-packages/_xmlplus/dom/expatbuilder.py", line 207, in parseFile JSV stderr: parser.Parse(buffer, 0) JSV stderr: xml.parsers.expat.ExpatError: syntax error: line 1, column 0 JSV stderr is - xml.parsers.expat.ExpatError: syntax error: line 1, column 0. Exiting.
Cron bryan@hawthorn qcronsub -l h_rt=00:10:00 -l arch=* -l virtual_free=200M -e $HOME/replag-plot.err -N replag-plot /home/bryan/public_html/stats/replag/make-plot.sh
Unable to run job: unable to send message to qmaster using port 536 on host "damiana": got send error. Exiting. error: commlib error: can't connect to service (Connection refused)
Cron bryan@hawthorn qcronsub -l h_rt=INFINITY -l arch=sol -l virtual_free=200M -e $HOME/flickr_index.err -N flickr_index $HOME/projects/flickr_old/index.sh error: JSV stderr: Traceback (most recent call last): error: JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 108, in
<module> Unable to run job: JSV stderr: Traceback (most recent call last): JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 108, in <module> JSV stderr is - File "/sge/GE/bin/sol-amd64/ qjobtest", line 108, in <module>. Exiting.
Cron bryan@hawthorn qcronsub -l h_rt=00:10:00 -l arch=* -l virtual_free=200M -e $HOME/replag-plot.err -N replag-plot /home/bryan/public_html/stats/replag/make-plot.sh
error: JSV stderr: Traceback (most recent call last): error: JSV stderr: File "/sge/GE/bin/sol-amd64/ qjobtest", line 105, in <module> error: JSV stderr: exitStatus = p.wait() error: JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/subprocess.py", line 1243, in wait error: JSV stderr: pid, sts = _eintr_retry_call(os.waitpid, self.pid, 0) error: JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/subprocess.py", line 471, in _eintr_retry_call error: JSV stderr: return func(*args) error: JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 89, in handleAlarm error: JSV stderr: sys.exit(nagiosStateUnknown) error: JSV stderr: NameError: global name 'nagiosStateUnknown' is not defined Unable to run job: JSV stderr: Traceback (most recent call last): JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 105, in <module> JSV stderr: exitStatus = p.wait() JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/subprocess.py", line 1243, in wait JSV stderr: pid, sts = _eintr_retry_call(os.waitpid, self.pid, 0) JSV stderr: File "/opt/ts/python/2.7/lib/python2.7/subprocess.py", line 471, in _eintr_retry_call JSV stderr: return func(*args) JSV stderr: File "/sge/GE/bin/sol-amd64/qjobtest", line 89, in handleAlarm JSV stderr: sys.exit(nagiosStateUnknown) JSV stderr: NameError: global name 'nagiosStateUnknown' is not defined JSV stderr is - NameError: global name 'nagiosStateUnknown' is not defined. Exiting.
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