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I looked at your SVN (in case we'd like to create a shared repository or put it into Pywiki's SVN) and I, too, found that you have actually your own copy of pywikipedia there. Are there any local changes that would need to be included in the mainline?
There are additional files, according to my repo [1] and it is based on pywikipedia r8990 (not the newest one - which is important).
[1] https://fisheye.toolserver.org/changelog/drtrigon
So there are no changes to the files in r8990.
I never include pywikipedia snapshot in the repository, I have an SVN checkout in $HOME/wikipieda/pywikipedia and it's included in $PYTHONPATH so all imports work.
Is also an idea to consider. I have the snapshot include since it is needed in order for the bot to work - and crutial to use to correct revision. Thus I decided to include it to help other users to get started! ;) What I am trying now is to use externals in svn, but this does no change to the issues discussed here.
Greetings DrTrigon